Adaptive mechanisms and genomic plasticity for drought tolerance identified in European black poplar (Populus nigra L.).
Identifieur interne : 001A17 ( Main/Exploration ); précédent : 001A16; suivant : 001A18Adaptive mechanisms and genomic plasticity for drought tolerance identified in European black poplar (Populus nigra L.).
Auteurs : Maud Viger [Royaume-Uni] ; Hazel K. Smith [Royaume-Uni] ; David Cohen [France] ; Jennifer Dewoody [États-Unis] ; Harriet Trewin [Royaume-Uni] ; Marijke Steenackers [Belgique] ; Catherine Bastien [France] ; Gail Taylor [Royaume-Uni]Source :
- Tree physiology [ 1758-4469 ] ; 2016.
Descripteurs français
- KwdFr :
- Adaptation physiologique (MeSH), Arbres (MeSH), Biomasse (MeSH), Eau (MeSH), Espagne (MeSH), Expression des gènes (MeSH), Feuilles de plante (croissance et développement), France (MeSH), Gènes de plante (MeSH), Génome végétal (MeSH), Génotype (MeSH), Italie (MeSH), Phénotype (MeSH), Populus (croissance et développement), Populus (génétique), Régulation de l'expression des gènes végétaux (MeSH), Régulation négative (MeSH), Stomates de plante (MeSH), Stress physiologique (MeSH), Sécheresses (MeSH), Transpiration des plantes (MeSH).
- MESH :
- croissance et développement : Feuilles de plante, Populus.
- génétique : Populus.
- Adaptation physiologique, Arbres, Biomasse, Eau, Espagne, Expression des gènes, France, Gènes de plante, Génome végétal, Génotype, Italie, Phénotype, Régulation de l'expression des gènes végétaux, Régulation négative, Stomates de plante, Stress physiologique, Sécheresses, Transpiration des plantes.
English descriptors
- KwdEn :
- Adaptation, Physiological (MeSH), Biomass (MeSH), Down-Regulation (MeSH), Droughts (MeSH), France (MeSH), Gene Expression (MeSH), Gene Expression Regulation, Plant (MeSH), Genes, Plant (MeSH), Genome, Plant (MeSH), Genotype (MeSH), Italy (MeSH), Phenotype (MeSH), Plant Leaves (growth & development), Plant Stomata (MeSH), Plant Transpiration (MeSH), Populus (genetics), Populus (growth & development), Spain (MeSH), Stress, Physiological (MeSH), Trees (MeSH), Water (MeSH).
- MESH :
- chemical : Water.
- genetics : Populus.
- growth & development : Plant Leaves, Populus.
- Adaptation, Physiological, Biomass, Down-Regulation, Droughts, France, Gene Expression, Gene Expression Regulation, Plant, Genes, Plant, Genome, Plant, Genotype, Italy, Phenotype, Plant Stomata, Plant Transpiration, Spain, Stress, Physiological, Trees.
Abstract
Summer droughts are likely to increase in frequency and intensity across Europe, yet long-lived trees may have a limited ability to tolerate drought. It is therefore critical that we improve our understanding of phenotypic plasticity to drought in natural populations for ecologically and economically important trees such as Populus nigra L. A common garden experiment was conducted using ∼500 wild P. nigra trees, collected from 11 river populations across Europe. Phenotypic variation was found across the collection, with southern genotypes from Spain and France characterized by small leaves and limited biomass production. To examine the relationship between phenotypic variation and drought tolerance, six genotypes with contrasting leaf morphologies were subjected to a water deficit experiment. 'North eastern' genotypes were collected at wet sites and responded to water deficit with reduced biomass growth, slow stomatal closure and reduced water use efficiency (WUE) assessed by Δ(13)C. In contrast, 'southern' genotypes originating from arid sites showed rapid stomatal closure, improved WUE and limited leaf loss. Transcriptome analyses of a genotype from Spain (Sp2, originating from an arid site) and another from northern Italy (Ita, originating from a wet site) revealed dramatic differences in gene expression response to water deficit. Transcripts controlling leaf development and stomatal patterning, including SPCH, ANT, ER, AS1, AS2, PHB, CLV1, ERL1-3 and TMM, were down-regulated in Ita but not in Sp2 in response to drought.
DOI: 10.1093/treephys/tpw017
PubMed: 27174702
PubMed Central: PMC4969554
Affiliations:
- Belgique, France, Royaume-Uni, États-Unis
- Californie, Centre-Val de Loire, Grand Est, Lorraine (région), Région Centre
- Orléans, Vandoeuvre
- Université de Lorraine
Links toward previous steps (curation, corpus...)
Le document en format XML
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Smith</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ, UK.</nlm:affiliation><country xml:lang="fr">Royaume-Uni</country><wicri:regionArea>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ</wicri:regionArea><wicri:noRegion>Southampton SO17 1BJ</wicri:noRegion></affiliation></author><author><name sortKey="Cohen, David" sort="Cohen, David" uniqKey="Cohen D" first="David" last="Cohen">David Cohen</name><affiliation wicri:level="4"><nlm:affiliation>UMR Ecologie et Ecophysiologie Forestières, INRA NANCY-Lorraine, 54280 Champenoux, France UMR Ecologie et Ecophysiologie Forestière, Université de Lorraine, BP 239, F-54506 Vandoeuvre, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>UMR Ecologie et Ecophysiologie Forestières, INRA NANCY-Lorraine, 54280 Champenoux, France UMR Ecologie et Ecophysiologie 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Forest (INBO), Geraardsbergen B-9500, Belgium.</nlm:affiliation><country xml:lang="fr">Belgique</country><wicri:regionArea>Ministry of the Flemish Community, Research Institute for Nature and Forest (INBO), Geraardsbergen B-9500</wicri:regionArea><wicri:noRegion>Geraardsbergen B-9500</wicri:noRegion></affiliation></author><author><name sortKey="Bastien, Catherine" sort="Bastien, Catherine" uniqKey="Bastien C" first="Catherine" last="Bastien">Catherine Bastien</name><affiliation wicri:level="3"><nlm:affiliation>INRA, Unité de Recherche Amélioration Génétique et Physiologie Forestières, 2163 avenue de la Pomme de Pin, CS 40001 Ardon, 45075 Orléans Cedex 2, France.</nlm:affiliation><country xml:lang="fr">France</country><wicri:regionArea>INRA, Unité de Recherche Amélioration Génétique et Physiologie Forestières, 2163 avenue de la Pomme de Pin, CS 40001 Ardon, 45075 Orléans Cedex 2</wicri:regionArea><placeName><region type="region" nuts="2">Centre-Val de Loire</region><region type="old region" nuts="2">Région Centre</region><settlement type="city">Orléans</settlement></placeName></affiliation></author><author><name sortKey="Taylor, Gail" sort="Taylor, Gail" uniqKey="Taylor G" first="Gail" last="Taylor">Gail Taylor</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ, UK g.taylor@soton.ac.uk.</nlm:affiliation><country wicri:rule="url">Royaume-Uni</country><wicri:regionArea>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ</wicri:regionArea><wicri:noRegion>Southampton SO17 1BJ</wicri:noRegion></affiliation></author></analytic><series><title level="j">Tree physiology</title><idno type="eISSN">1758-4469</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Adaptation, Physiological (MeSH)</term><term>Biomass (MeSH)</term><term>Down-Regulation (MeSH)</term><term>Droughts (MeSH)</term><term>France (MeSH)</term><term>Gene Expression (MeSH)</term><term>Gene Expression Regulation, Plant (MeSH)</term><term>Genes, Plant (MeSH)</term><term>Genome, Plant (MeSH)</term><term>Genotype (MeSH)</term><term>Italy (MeSH)</term><term>Phenotype (MeSH)</term><term>Plant Leaves (growth & development)</term><term>Plant Stomata (MeSH)</term><term>Plant Transpiration (MeSH)</term><term>Populus (genetics)</term><term>Populus (growth & development)</term><term>Spain (MeSH)</term><term>Stress, Physiological (MeSH)</term><term>Trees (MeSH)</term><term>Water (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Adaptation physiologique (MeSH)</term><term>Arbres (MeSH)</term><term>Biomasse (MeSH)</term><term>Eau (MeSH)</term><term>Espagne (MeSH)</term><term>Expression des gènes (MeSH)</term><term>Feuilles de plante (croissance et développement)</term><term>France (MeSH)</term><term>Gènes de plante (MeSH)</term><term>Génome végétal (MeSH)</term><term>Génotype (MeSH)</term><term>Italie (MeSH)</term><term>Phénotype (MeSH)</term><term>Populus (croissance et développement)</term><term>Populus (génétique)</term><term>Régulation de l'expression des gènes végétaux (MeSH)</term><term>Régulation négative (MeSH)</term><term>Stomates de plante (MeSH)</term><term>Stress physiologique (MeSH)</term><term>Sécheresses (MeSH)</term><term>Transpiration des plantes (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>Water</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Feuilles de plante</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Plant Leaves</term><term>Populus</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Adaptation, Physiological</term><term>Biomass</term><term>Down-Regulation</term><term>Droughts</term><term>France</term><term>Gene Expression</term><term>Gene Expression Regulation, Plant</term><term>Genes, Plant</term><term>Genome, Plant</term><term>Genotype</term><term>Italy</term><term>Phenotype</term><term>Plant Stomata</term><term>Plant Transpiration</term><term>Spain</term><term>Stress, Physiological</term><term>Trees</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Adaptation physiologique</term><term>Arbres</term><term>Biomasse</term><term>Eau</term><term>Espagne</term><term>Expression des gènes</term><term>France</term><term>Gènes de plante</term><term>Génome végétal</term><term>Génotype</term><term>Italie</term><term>Phénotype</term><term>Régulation de l'expression des gènes végétaux</term><term>Régulation négative</term><term>Stomates de plante</term><term>Stress physiologique</term><term>Sécheresses</term><term>Transpiration des plantes</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Summer droughts are likely to increase in frequency and intensity across Europe, yet long-lived trees may have a limited ability to tolerate drought. It is therefore critical that we improve our understanding of phenotypic plasticity to drought in natural populations for ecologically and economically important trees such as Populus nigra L. A common garden experiment was conducted using ∼500 wild P. nigra trees, collected from 11 river populations across Europe. Phenotypic variation was found across the collection, with southern genotypes from Spain and France characterized by small leaves and limited biomass production. To examine the relationship between phenotypic variation and drought tolerance, six genotypes with contrasting leaf morphologies were subjected to a water deficit experiment. 'North eastern' genotypes were collected at wet sites and responded to water deficit with reduced biomass growth, slow stomatal closure and reduced water use efficiency (WUE) assessed by Δ(13)C. In contrast, 'southern' genotypes originating from arid sites showed rapid stomatal closure, improved WUE and limited leaf loss. Transcriptome analyses of a genotype from Spain (Sp2, originating from an arid site) and another from northern Italy (Ita, originating from a wet site) revealed dramatic differences in gene expression response to water deficit. Transcripts controlling leaf development and stomatal patterning, including SPCH, ANT, ER, AS1, AS2, PHB, CLV1, ERL1-3 and TMM, were down-regulated in Ita but not in Sp2 in response to drought.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">27174702</PMID><DateCompleted><Year>2017</Year><Month>10</Month><Day>03</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1758-4469</ISSN><JournalIssue CitedMedium="Internet"><Volume>36</Volume><Issue>7</Issue><PubDate><Year>2016</Year><Month>07</Month></PubDate></JournalIssue><Title>Tree physiology</Title><ISOAbbreviation>Tree Physiol</ISOAbbreviation></Journal><ArticleTitle>Adaptive mechanisms and genomic plasticity for drought tolerance identified in European black poplar (Populus nigra L.).</ArticleTitle><Pagination><MedlinePgn>909-28</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1093/treephys/tpw017</ELocationID><Abstract><AbstractText>Summer droughts are likely to increase in frequency and intensity across Europe, yet long-lived trees may have a limited ability to tolerate drought. It is therefore critical that we improve our understanding of phenotypic plasticity to drought in natural populations for ecologically and economically important trees such as Populus nigra L. A common garden experiment was conducted using ∼500 wild P. nigra trees, collected from 11 river populations across Europe. Phenotypic variation was found across the collection, with southern genotypes from Spain and France characterized by small leaves and limited biomass production. To examine the relationship between phenotypic variation and drought tolerance, six genotypes with contrasting leaf morphologies were subjected to a water deficit experiment. 'North eastern' genotypes were collected at wet sites and responded to water deficit with reduced biomass growth, slow stomatal closure and reduced water use efficiency (WUE) assessed by Δ(13)C. In contrast, 'southern' genotypes originating from arid sites showed rapid stomatal closure, improved WUE and limited leaf loss. Transcriptome analyses of a genotype from Spain (Sp2, originating from an arid site) and another from northern Italy (Ita, originating from a wet site) revealed dramatic differences in gene expression response to water deficit. Transcripts controlling leaf development and stomatal patterning, including SPCH, ANT, ER, AS1, AS2, PHB, CLV1, ERL1-3 and TMM, were down-regulated in Ita but not in Sp2 in response to drought.</AbstractText><CopyrightInformation>© The Author 2016. Published by Oxford University Press.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Viger</LastName><ForeName>Maud</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Smith</LastName><ForeName>Hazel K</ForeName><Initials>HK</Initials><AffiliationInfo><Affiliation>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Cohen</LastName><ForeName>David</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>UMR Ecologie et Ecophysiologie Forestières, INRA NANCY-Lorraine, 54280 Champenoux, France UMR Ecologie et Ecophysiologie Forestière, Université de Lorraine, BP 239, F-54506 Vandoeuvre, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Dewoody</LastName><ForeName>Jennifer</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ, UK Present address: USDA Forest Service, National Forest Genetics Lab, 2480 Carson Road, Placerville, CA 95667, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Trewin</LastName><ForeName>Harriet</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ, UK.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Steenackers</LastName><ForeName>Marijke</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Ministry of the Flemish Community, Research Institute for Nature and Forest (INBO), Geraardsbergen B-9500, Belgium.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bastien</LastName><ForeName>Catherine</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>INRA, Unité de Recherche Amélioration Génétique et Physiologie Forestières, 2163 avenue de la Pomme de Pin, CS 40001 Ardon, 45075 Orléans Cedex 2, France.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Taylor</LastName><ForeName>Gail</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Centre for Biological Sciences, University of Southampton, Life Sciences Building, Southampton SO17 1BJ, UK g.taylor@soton.ac.uk.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2016</Year><Month>05</Month><Day>11</Day></ArticleDate></Article><MedlineJournalInfo><Country>Canada</Country><MedlineTA>Tree Physiol</MedlineTA><NlmUniqueID>100955338</NlmUniqueID><ISSNLinking>0829-318X</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>059QF0KO0R</RegistryNumber><NameOfSubstance UI="D014867">Water</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000222" MajorTopicYN="Y">Adaptation, Physiological</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D018533" MajorTopicYN="N">Biomass</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D015536" MajorTopicYN="N">Down-Regulation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D055864" MajorTopicYN="Y">Droughts</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005602" 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